Protein ZmFHA4
ZmFHA4 is a protein in the FHA family.
Information
Coreg Name: ZmFHA4
Species: Maize
Coreg Family: FHA
Gene Name(Synonym): FHA4
Uniprot ID: A0A1D6PDQ1
Subgenome: 1

Protein ZmFHA4

ZmFHA4 is a protein in the FHA family. NOTE the "Uniprot ID" shown on the right is a placeholder for testing. The interactive structure shown is based on that id.

Overview of domains present in v5 transcripts
PF00498
Zm00001eb056120_T002
Zm00001eb056120_T001

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs


Gene IDTypeMEME LogoSequenceFIMOPosition
Zm00001d033884DAPseq no logo sequence fimo position
Zm00001d033884DAPseq no logo sequence fimo position
Zm00001d033884ChIPseq no logo sequence fimo position
Zm00001d033884PChIPseq no logo sequence fimo position
Zm00001d049378DAPseq no logo sequence fimo position
Zm00001d049378DAPseq no logo sequence fimo position
Zm00001d049378ChIPseq no logo sequence fimo position
Zm00001d049378PChIPseq no logo sequence fimo position

Interactions where ZmFHA4 is the regulator


There are no protein-dna interactions that fit this criteria.

Interactions where ZmFHA4 is the target  
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There are 36 protein-dna interactions that fit this criteria. download excel sheet

Zm00001eb056120_T002 from maize genome v5

Amino Acid Sequence
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MADPPPVLTLLVKKGPCKGNTLQRCAGTEALRVGRVAKGNDLSVGDAGASQRHLSVEFLPPPAARWTVTDLGSSNGTLLN
ATPLVATIPAPLSDGDLIKIGETTVLAVSISTDAGPGPGPVATRRSRRNAAAAADEQGPAVPRRAGRRKAGATEAPEAGN
EVEEEAALPTRRGGRRKTVEPARVETEAEDEEEEAAIPRRGRSRKAAATVVLPPQPQNTRSTRAAARKGDVLGCENDEGK
VMRTGRGRGRVTRSSARNDTGVTQEEEEGEVAVARDREGTAAGGKDEVVPAAGRVQAKRSRGGRGRGRATTASTRKAEDA
VAENDENEQEERDMADGRERGGSPLRVLAVNDGSEVDKVATEDKLDGTSKASMEDEKMEDLTLTERAIKGSANVKHAPAD
NGGVEEEEVKNLSKGEETEVYQELREKVSPGSKPDGVGEVEKNEKREAVGASGERGHVGVGEPKGRHRLENMTLGEWFVQ
IEKYLLAKNEEAAEKAIAEVQEKHRWFCEHVKTLKLKKSLAP

MADPPPVLTLLVKKGPCKGNTLQRCAGTEALRVGRVAKGNDLSVGDAGASQRHLSVEFLPPPAARWTVTDLGSSNGTLLN
ATPLVATIPAPLSDGDLIKIGETTVLAVSISTDAGPGPGPVATRRSRRNAAAAADEQGPAVPRRAGRRKAGATEAPEAGN
EVEEEAALPTRRGGRRKTVEPARVETEAEDEEEEAAIPRRGRSRKAAATVVLPPQPQNTRSTRAAARKGDVLGCENDEGK
VMRTGRGRGRVTRSSARNDTGVTQEEEEGEVAVARDREGTAAGGKDEVVPAAGRVQAKRSRGGRGRGRATTASTRKAEDA
VAENDENEQEERDMADGRERGGSPLRVLAVNDGSEVDKVATEDKLDGTSKASMEDEKMEDLTLTERAIKGSANVKHAPAD
NGGVEEEEVKNLSKGEETEVYQELREKVSPGSKPDGVGEVEKNEKREAVGASGERGHVGVGEPKGRHRLENMTLGEWFVQ
IEKYLLAKNEEAAEKAIAEVQEKHRWFCEHVKTLKLKKSLAP

MADPPPVLTLLVKKGPCKGNTLQRCAGTEALRVGRVAKGNDLSVGDAGASQRHLSVEFLPPPAARWTVTDLGSSNGTLLN
ATPLVATIPAPLSDGDLIKIGETTVLAVSISTDAGPGPGPVATRRSRRNAAAAADEQGPAVPRRAGRRKAGATEAPEAGN
EVEEEAALPTRRGGRRKTVEPARVETEAEDEEEEAAIPRRGRSRKAAATVVLPPQPQNTRSTRAAARKGDVLGCENDEGK
VMRTGRGRGRVTRSSARNDTGVTQEEEEGEVAVARDREGTAAGGKDEVVPAAGRVQAKRSRGGRGRGRATTASTRKAEDA
VAENDENEQEERDMADGRERGGSPLRVLAVNDGSEVDKVATEDKLDGTSKASMEDEKMEDLTLTERAIKGSANVKHAPAD
NGGVEEEEVKNLSKGEETEVYQELREKVSPGSKPDGVGEVEKNEKREAVGASGERGHVGVGEPKGRHRLENMTLGEWFVQ
IEKYLLAKNEEAAEKAIAEVQEKHRWFCEHVKTLKLKKSLAP

MADPPPVLTLLVKKGPCKGNTLQRCAGTEALRVGRVAKGNDLSVGDAGASQRHLSVEFLPPPAARWTVTDLGSSNGTLLN
ATPLVATIPAPLSDGDLIKIGETTVLAVSISTDAGPGPGPVATRRSRRNAAAAADEQGPAVPRRAGRRKAGATEAPEAGN
EVEEEAALPTRRGGRRKTVEPARVETEAEDEEEEAAIPRRGRSRKAAATVVLPPQPQNTRSTRAAARKGDVLGCENDEGK
VMRTGRGRGRVTRSSARNDTGVTQEEEEGEVAVARDREGTAAGGKDEVVPAAGRVQAKRSRGGRGRGRATTASTRKAEDA
VAENDENEQEERDMADGRERGGSPLRVLAVNDGSEVDKVATEDKLDGTSKASMEDEKMEDLTLTERAIKGSANVKHAPAD
NGGVEEEEVKNLSKGEETEVYQELREKVSPGSKPDGVGEVEKNEKREAVGASGERGHVGVGEPKGRHRLENMTLGEWFVQ
IEKYLLAKNEEAAEKAIAEVQEKHRWFCEHVKTLKLKKSLAP

MADPPPVLTLLVKKGPCKGNTLQRCAGTEALRVGRVAKGNDLSVGDAGASQRHLSVEFLPPPAARWTVTDLGSSNGTLLN
ATPLVATIPAPLSDGDLIKIGETTVLAVSISTDAGPGPGPVATRRSRRNAAAAADEQGPAVPRRAGRRKAGATEAPEAGN
EVEEEAALPTRRGGRRKTVEPARVETEAEDEEEEAAIPRRGRSRKAAATVVLPPQPQNTRSTRAAARKGDVLGCENDEGK
VMRTGRGRGRVTRSSARNDTGVTQEEEEGEVAVARDREGTAAGGKDEVVPAAGRVQAKRSRGGRGRGRATTASTRKAEDA
VAENDENEQEERDMADGRERGGSPLRVLAVNDGSEVDKVATEDKLDGTSKASMEDEKMEDLTLTERAIKGSANVKHAPAD
NGGVEEEEVKNLSKGEETEVYQELREKVSPGSKPDGVGEVEKNEKREAVGASGERGHVGVGEPKGRHRLENMTLGEWFVQ
IEKYLLAKNEEAAEKAIAEVQEKHRWFCEHVKTLKLKKSLAP

Secondary Structure Color Code
BEND region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P left-handed polyproline helix
HELX_RH_3T_P right-handed 3-10 helix
HELX_RH_AL_P right-handed alpha helix
HELX_RH_PI_P right-handed pi helix
STRN beta strand
TURN_TY1_P type I turn
UNDETERMINED no data available
Domains Present
PF00498
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Nucleotide Sequence
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ACTCCATAGCAGCGGCCAGTACTTT...

GRMZM2G359217_T01 from maize genome v3


Related TFome: pUT5731

Amino Acid Sequence
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MADPPPVLTLLVKKGPCKGNTLQRCAGTEALRVGRVAKGNDLSVGDAGASQRHLSVEFLPPPAARWTVTDLGSSNGTLLN
ATPLVATIPAPLSDGDLIKIGETTVLAVSISTDAGPGPGPVATRRSRRNAAAAADEQGPAVPRRAGRRKAGATEAPEAGN
EVEEEAALPTRRGGRRKTVEPARVETEAEDEEEEAAIPRRGRSRKAAATVVLPPQPQNTRSTRAAARKGDVLGCENDEGK
VMRTGRGRGRVTRSSARNDTGVTQEEEEGEVAVARDREGTAAGGKDEVVPAAGRVQAKRSRGGRGRGRATTASTRKAEDA
VAENDENEQEERDMADGRERGGSPLRVLAVNDGSEVDKVATEDKLDGTSKASMEDEKMEDLTLTERAIKGSANVKHAPAD
NGGVEEEEVKNLSKGEETEVYQELREKVSPGSKPDGVGEVEKNEKREAVGASGERGHVGVGEPKGRHRLENMTLGEWFVQ
IEKYLLAKNEEAAEKAIAEVQEKHRWFCEHVKTLKLKKSLAP

Nucleotide Sequence
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CGGTTTTTTGTAAACCGTGCTCCAC...

Zm00001d033884_T001 from maize genome v4

Amino Acid Sequence
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MADPPPVLTLLVKKGPCKGNTLQRCAGTEALRVGRVAKGNDLSVGDAGASQRHLSVEFLPPPAARWTVTDLGSSNGTLLN
ATPLVATIPAPLSDGDLIKIGETTVLAVSISTDAGPGPGPVATRRSRRNAAAAADEQGPAVPRRAGRRKAGATEAPEAGN
EVEEEAALPTRRGGRRKTVEPARVETEAEDEEEEAAIPRRGRSRKAAATVVLPPQPQNTRSTRAAARKGDVLGCENDEGK
VMRTGRGRGRVTRSSARNDTGVTQEEEEGEVAVARDREGTAAGGKDEVVPAAGRVQAKRSRGGRGRGRATTASTRKAEDA
VAENDENEQEERDMADGRERGGSPLRVLAVNDGSEVDKVATEDKLDGTSKASMEDEKMEDLTLTERAIKGSANVKHAPAD
NGGVEEEEVKNLSKGEETEVYQELREKVSPGSKPDGVGEVEKNEKREAVGASGERGHVGVGEPKGRHRLENMTLGEWFVQ
IEKYLLAKNEEAAEKAIAEVQEKHRWFCEHVKTLKLKKSLAP

Nucleotide Sequence
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ATGGCGGATCCGCCGCCTGTGCTTA...

Zm00001d049378_T001 from maize genome v4

Amino Acid Sequence
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MPPPPPPVRDAPTAPHRPRESASGHQKVRFRRKRLAVARRPTPRHLAHTPTSIAHRTVSISTSCSSSSVSPTTSHPVVVA
LTAAPAIEACGDVLLRYPLQPGGSAPHPAPAPAGRAGPVPHQHAALREHHHIRHAHLRRGQRLAALHVPPRPPRRAEKTP
STAASSPAAASTSNHALAYASVATRRSVTLAGTPGGSVRLFSPSVAPPMAGW

Nucleotide Sequence
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ATGCCCCCGCCTCCGCCTCCCGTGC...

Zm00001eb056120_T001 from maize genome v5

Amino Acid Sequence
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MADPPPVLTLLVKKGPCKGNTLQRCAGTEALRVGRVAKGNDLSVGDAGASQRHLSVEFLPPPAARWTVTDLGSSNGTLLN
ATPLVATIPAPLSDGDLIKIGETTVLAVSISTDAGPGPGPVATRRSRRNAAAAADEQGPAVPRRAGRRKAGATEAPEAGN
EVEEEAALPTRRGGRRKTVEPARVETEAEDEEEEAAIPRRGRSRKAAATVVLPPQPQNTRSTRAAARKGDVLGCENDEGK
VMRTGRGRGRVTRSSARNDTGVTQEEEEGEVAVARDREGTAAGGKDEVVPAAGRVQAKRSRGGRGRGRATTASTRKAEDA
VAENDENEQEERDMADGRERGGSPLRVLAVNDGSEVDKVATEDKLDGTSKASMEDEKMEDLTLTERAIKGSANVKHAPAD
NGGVEEEEVKNLSKGEETEVYQELREKVSPGSKPDGVGEVEKNEKREAVGASGERGHVGVGEPKGRHRLENMTLGEWFVQ
IEKYLLAKNEEAAEKAIAEVQEKHRWFCEHVKTLKLKKSLAP

Nucleotide Sequence
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ACTCCATAGCAGCGGCCAGTACTTT...


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